Publications

2023

Valakh V., Wise D., Zhu X.A., Sha M., Fok J., Van Hooser S.D., Schectman R., Cepeda I., Kirk R., O’Toole S. and Nelson S.B. (2023) A transcriptional constraint mechanism limits the homeostatic response to activity deprivation in mammalian neocortex. Elife. Accepted February 3rd.

2021

Nanu RD, Murdy TJ, Levitan D, Nelson SB, Katz DB (2021) Loss of Stk11 in basolateral amygdalar projection neurons impairs taste aversion learning by altering the temporal pattern of taste response plasticity in gustatory cortex bioRxiv 2021.05.31.446460 [Preprint]; doi: https://doi.org/10.1101/2021.05.31.446460.

Valakh V., Zhu X.A., Wise D., Van Hooser S., Schectman R., Cepeda I., Kirk R., O’Toole S. and Nelson S.B. (2021) A transcriptional constraint mechanism limits the homeostatic response to activity deprivation in mammalian neocortex. bioRxiv 2021.10.20.465163 [Preprint]; doi: https://doi.org/10.1101/2021.10.20.465163.

2020

Clark EA, Rutlin M, Capano L, Aviles S, Saadon JR, Taneja P, Zhang Q, Bullis J, Lauer T, Myers E, Schulmann A, Forrest D, Nelson SB (2020) Cortical RORb is required for layer 4 transcriptional identity and barrel integrity. Elife. 9:e52370. doi: 10.7554/eLife.52370.

Levitan D, Liu C, Yang T, Shima Y, Lin JY, Wachutka J, Marrero Y, Ali Marandi Ghoddousi R, Veiga Beltrame ED, Richter TA, Katz DB, Nelson SB (2020) Deletion of Stk11 and Fos in BLA projection neurons alters their intrinsic excitability and impairs formation of long-term aversive memory. Elife. 9:e61036. doi: 10.7554/eLife.61036.

2019

Clark EA, Rutlin M, Capano L, Aviles S, Saadon JR, Taneja P, Zhang Q, Bullis J, Lauer T, Myers E, Schulmann A, Forrest D, Nelson SB (2019) Cortical RORb is required for layer 4 transcriptional identity and barrel integrity. bioRxiv 782995 [Preprint]. doi: https://doi.org/10.1101/782995.

Levitan D, Liu C, Lin J-Y, Wachutka J, Marrero Y, Beltrame E, Shima Y, Ghoddousi AR, Yang T, Katz DB and Nelson SB (2019) Deletion of Stk11 and Fos in BLA projection neurons alters their intrinsic excitability and impairs formation of long-term aversive memory. bioRxiv 787325v1 [Preprint]. doi: https://doi.org/10.1101/787325.

Phillips JW, Schulmann A, Hara E, Winnubst J, Liu C, Valakh V, Wang L, Shields B, Korff W, Chandrashekar J, Lemire A, Mensh B, Dudman J, Nelson SB, Hantman A (2019) A defining spectrum of neuronal identities across thalamic pathways. Nature Neurosci. doi: 10.1038/s41593-019-0483-3. *Corresponding authors.

Sugino K, Clark E, Schulmann A, Shima Y, Wang L, Hunt DL, Hooks BM, Trankner D, Chandrashekar J, Picard S, Lemire A, Spruston N, Hantman A, and Nelson SB (2019) Mapping the transcriptional diversity of genetically and anatomically defined cell populations in the mouse brain. ELife. 8. pii: e38619. doi: 10.7554/eLife.38619. *Corresponding authors.

Levitan D, Lin J-Y, Wachutka J, Mukherjee N, Nelson SB, and Katz DB (2019) Single and population coding of taste in the gustatory cortex of awake mice. J. Neurophysiol. 122(4):1342-1356. doi: 10.1152/jn.00357.2019.

Clark EA, Shima Y, Nelson SB (2019) ATAC-seq on Sorted Adult Mouse Neurons. Bio-protocol. 10.21769/BioProtoc.3382.

2018

Flores VL, Parmet T, Mukherjee N, Nelson SB, Katz DB, and Levitan D (2018) The role of the gustatory cortex in experience-evoked enhancement of learning. bioRxiv 369520 [Preprint]. doi: https://doi.org/10.1101/369520. Now published. Learning and Memory. 25(11):587-600. doi: 10.1101/lm.048181.118.

Phillips JW, Schulmann A, Hara E, Liu C, Shields B, Korff W, Lemire A, Dudman J, Nelson SB, and Hantman A. A topographic axis of transcriptional identity in thalamus. bioRxiv 241315 [Preprint]. doi: https://doi.org/10.1101/241315.